biopython
error comparing sequences - string interpreted as number
I\'m trying to do something similar with my previous question. My purpose is to join all sequences that are equal. But this time instead of letters, I have numbers.[详细]
2023-04-02 07:43 分类:问答A PWM with gapped alignments in Biopython
I\'m trying to generate a Position-Weighted Matrix (PWM) in Biopython from Clustalw multipl开发者_高级运维e sequence alignments.I get a \"Wrong Alphabet\" error every time I do it with gapped alignmen[详细]
2023-03-26 19:45 分类:问答Biopython not working on Window 7 64 (import bio function not working)
I am having trouble using biopython as my \'import bio\' does not work. I have Window 7 , 64-bit system with Python 2.7.1 with Piston, Django and NumPy site packages installed and they all work well[详细]
2023-03-18 12:00 分类:问答biopython import in Enthought Python Distribution?
I am using the Enthought Python Distribution v7.0-2 (32-bit) a开发者_运维问答nd I am having trouble importing biopython. Does anyone know how to import biopython in EPD? I can import other libraries l[详细]
2023-03-17 05:26 分类:问答Getting top 10 sequences of BLAST results Bio Python
I want to get top 10 sequences of BLAST results (just the sequences, no alignment or score or e-value etc). I am inputting a text file containing 5 fasta file. So my output should be top 10 blast hits[详细]
2023-03-17 02:04 分类:问答How can I run clustalw using Biopython
I am using windows 7. I have installed python 2.7 and Biopython 1.57. I created the following script:[详细]
2023-03-15 01:36 分类:问答Convert GenBank Flatfiles to FASTA
I need to parse a preliminary GenBank Flatfile. The sequence hasn\'t been published yet, so I can\'t look it up by accession and download a FASTA file. I\'m new to Bioinformatics, so could someone 开发[详细]
2023-03-12 10:14 分类:问答have trouble in installing biopython package
im using mac 10.6.7, and xcode 4 with gcc 4.2 installed. but when i was installing biopython with: python setup.py install[详细]
2023-03-11 12:48 分类:问答ImportError: No module named writers.SeqRecord.fasta
# File Name RandonProteinSequences.py # standard library import os import random # biopython from Bio.Seq import Seq[详细]
2023-03-07 05:48 分类:问答renumber residues in a protein structure file (pdb)
Hi I am currently involved in making a website aimed at combining all papillomavirus information in a single place.[详细]
2023-03-06 00:44 分类:问答