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Parsing a uniprot flat file

开发者 https://www.devze.com 2023-02-07 16:05 出处:网络
开发者_如何学CCan anybody please let me know or help with parsing a uniprot flat file and access the information in the annotation (FT) line and produce an output file in python script. FT line is the

开发者_如何学CCan anybody please let me know or help with parsing a uniprot flat file and access the information in the annotation (FT) line and produce an output file in python script. FT line is the on in a general uniprot flat file describing the nature of the proteins. Script written to this must produce an output file with the information in this line.


I suggest looking at biopython: http://biopython.org

In particular, their SeqIO module: http://biopython.org/wiki/SeqIO

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