From the online bar chart guide:
qplot(factor(cyl), data=mtcars, geom="bar", fill=factor(gear))
How do I get 5 to sit on the bottom, 4 above that, and 3 on top?
qplot(factor(cyl), data=mtcars, geom="bar", fill=factor(gear), order = -gear)
qplot(factor(cyl), data=mtcars, geom='bar', fill=factor(gear, level=5:3))
To generalize @xiechao's solution (@hadley's doesn't work in latest ggplot), you can reverse the factor orders to achieve this:
library(ggplot2)
data(mtcars)
mtcars$gear <- factor(mtcars$gear) # First make factor with default levels
mtcars$gear <- factor(mtcars$gear, levels=rev(levels(mtcars$gear)))
qplot(cyl, data=mtcars, geom="bar", fill=gear)
# Or with ggplot
ggplot(mtcars, aes(factor(cyl), fill=gear)) + geom_bar()
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